STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23856.1Putative O-methyltransferase. (281 aa)    
Predicted Functional Partners:
EFL23855.1
Conserved hypothetical protein.
       0.671
purD
Phosphoribosylamine-glycine ligase; Belongs to the GARS family.
 
      0.625
EFL23857.1
TetR family transcriptional regulator; Unextendable partial coding region.
       0.476
EFL27951.1
O-methyltransferase.
  
  
  0.471
EFL27929.1
O-demethylpuromycin-O-methyltransferase.
  
  
  0.458
EFL23854.1
Histidine kinase.
       0.453
EFL21074.1
Tetracenomycin polyketide synthesis 8-O-methyltransferase.
  
  
  0.448
EFL28881.1
Monooxygenase, FAD-binding.
  
  
  0.436
EFL23858.1
Conserved hypothetical protein.
       0.414
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.