Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL23858.1Conserved hypothetical protein. (297 aa)    
Predicted Functional Partners:
EFL23860.1
Putative thioesterase.
 
  
 0.980
lcdH
3-hydroxyacyl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
  
 0.971
EFL21255.1
Probable 3-hydroxyacyl-CoA dehydrogenase protein.
 
 
 0.929
EFL22662.1
Putative cyclase.
  
  
 0.861
EFL23857.1
TetR family transcriptional regulator; Unextendable partial coding region.
 
     0.758
EFL23964.1
Conserved hypothetical protein.
  
  
 0.689
EFL28029.1
Putative cyclase.
  
  
 0.689
EFL22611.1
3-ketoacyl-CoA thiolase (Fatty acid oxidation complexsubunit beta) (Beta-ketothiolase) (Acetyl-CoA acyltransferase); Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.688
EFL26549.1
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.688
EFL22412.1
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
    
  0.679
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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