STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23863.1Putative transcriptional regulator. (399 aa)    
Predicted Functional Partners:
EFL27016.1
Putative DNA-binding transcriptional regulator.
  
    0.719
EFL23154.1
MarR family transcriptional regulator.
  
    0.707
EFL21640.1
Putative transcriptional regulator.
   
    0.657
EFL22360.1
NAD-dependent deacetylase 2.
   
    0.644
EFL27741.1
Conserved hypothetical protein; Unextendable partial coding region.
   
    0.644
EFL21630.1
Non-ribosomal peptide synthetase.
  
 
 0.643
EFL21735.1
Leucine-responsive regulatory protein.
   
    0.639
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.629
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 
 0.626
EFL22273.1
Transcriptional regulator DarR.
   
    0.625
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.