STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23865.1Putative D-cysteine desulfhydrase. (308 aa)    
Predicted Functional Partners:
EFL28587.1
Truncated CDS; 1-aminocyclopropane-1-carboxylate deaminase (ACCdeaminase) (ACCD).
  
  
  0.825
EFL27800.1
1-aminocyclopropane-1-carboxylate deaminase.
  
  
 
0.822
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.761
EFL28082.1
Putative aminotransferase B.
    
  0.606
EFL28533.1
Putative aminotransferase.
    
  0.606
EFL23332.1
Putative N-acetylmuramoyl-L-alanine amidase.
       0.605
EFL23335.1
Acetyltransferase, GNAT family protein.
       0.605
EFL23614.1
Cystathionine gamma-synthase.
     
 0.599
EFL24725.1
Cys/Met metabolism PLP-dependent enzyme family protein.
     
 0.599
EFL23337.1
Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
       0.591
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.