STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23866.1Conserved hypothetical protein. (319 aa)    
Predicted Functional Partners:
EFL27086.1
Conserved hypothetical protein.
  
     0.649
EFL22981.1
Putative polysaccharide lyase family 8.
  
     0.630
EFL28329.1
Conserved hypothetical protein.
  
     0.606
EFL22191.1
Putative ricin-type beta-trefoil lectin domain protein.
  
     0.600
EFL28443.1
PE-PGRS family protein.
  
     0.596
EFL22315.1
PAS domain protein.
  
     0.595
EFL23867.1
DNA ligase, ATP-dependent.
       0.592
EFL23869.1
DNA polymerase LigD, polymerase domain protein.
       0.592
EFL21346.1
Conserved hypothetical protein.
  
     0.587
EFL29178.1
PE-PGRS family protein.
  
     0.583
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.