STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23908.1Probable transcriptional regulator YdhC. (228 aa)    
Predicted Functional Partners:
EFL20640.1
Regulatory protein GntR, HTH.
  
     0.774
EFL28362.1
GntR family transcriptional regulator.
  
     0.773
EFL26418.1
GntR family transcriptional regulator.
  
  
 0.767
EFL22554.1
GntR family transcriptional regulator.
  
  
 0.763
EFL27999.1
GntR family L-asparagine operon transcriptional regulator (repressor).
  
  
 0.758
EFL20589.1
Putative transcriptional regulator, GntR family protein; Unextendable partial coding region.
  
     0.754
EFL25775.1
Transcriptional regulator, GntR-family.
  
  
 0.754
EFL21202.1
GntR family transcriptional regulator.
  
  
 0.747
EFL27581.1
GntR family transcriptional regulator.
  
  
 0.747
EFL28048.1
Regulatory protein GntR, HTH.
  
  
 0.742
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.