STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23909.1Aspartate racemase. (241 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.819
EFL25055.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
  0.797
EFL25854.1
Decarboxylase.
     
 0.795
EFL25087.1
L-aspartate oxidase (LASPO) (Quinolinate synthetase B).
     
 0.793
EFL23910.1
Proton/sodium-glutamate symporter protein GltT; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.779
EFL20382.1
Aspartate ammonia-lyase.
   
 0.754
EFL21330.1
Aspartate ammonia-lyase.
   
 0.754
EFL24349.1
Conserved hypothetical protein.
    
 0.734
EFL23513.1
Asparaginase.
 
  
 0.726
EFL26887.1
L-asparaginase.
 
  
 0.724
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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