STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23914.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
EFL23915.1
Conserved hypothetical protein.
       0.773
EFL29401.1
Collagen alpha-1(XI) chain protein.
  
   0.748
EFL26282.1
Glycosyl hydrolase family 10.
  
 0.632
EFL28409.1
Putative pectinesterase/pectate lyase protein.
    
 0.576
EFL23913.1
Membrane protein.
       0.564
EFL23912.1
Streptomycin 3''-kinase (Streptomycin 3''-phosphotransferase) (Streptomycin 6-phosphotransferase) (Streptomycin6-kinase); Belongs to the aminoglycoside phosphotransferase family.
       0.563
EFL20866.1
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
  
  0.543
EFL25111.1
Conserved hypothetical protein.
  
  0.543
EFL28350.1
Endo-polygalacturonase.
  
  0.543
EFL22777.1
Conserved hypothetical protein.
   
  0.522
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.