STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23917.1Probable cell surface glycoprotein. (305 aa)    
Predicted Functional Partners:
EFL23407.1
Thiazole biosynthesis adenylyltransferase ThiF.
  
 0.772
EFL27628.1
ThiJ/PfpI family protein.
    
 0.624
EFL26613.1
Putative N-methylproline demethylase.
  
 
 0.589
EFL22606.1
Coenzyme A disulfide reductase (CoA-disulfide reductase)(CoADR).
    
 0.575
EFL26838.1
Ferredoxin reductase.
    
 0.575
EFL23177.1
Conserved hypothetical protein.
  
     0.572
ybeY
Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.566
EFL20757.1
Conserved hypothetical protein; Truncated CDS.
  
     0.561
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.556
EFL26494.1
Conserved hypothetical protein.
  
     0.551
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.