STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23928.1Amidohydrolase 2. (411 aa)    
Predicted Functional Partners:
EFL23923.1
Putative D-aminoacylase.
 
     0.829
EFL23924.1
Conserved hypothetical protein.
 
     0.738
EFL25251.1
Conserved hypothetical protein.
  
     0.724
EFL21359.1
Isochorismatase; Unextendable partial coding region.
  
     0.669
EFL23388.1
UBA/THIF-type NAD/FAD binding fold protein; Truncated CDS.
  
     0.646
EFL23961.1
Phenylacetaldehyde dehydrogenase.
  
 
  0.638
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
  
 
  0.629
EFL22935.1
Conserved hypothetical protein.
  
     0.624
EFL25774.1
Putative glycosyl transferase (match).
  
  
  0.589
EFL27333.1
Putative glycosyl transferase (match).
  
  
  0.556
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.