STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23974.1Putative membrane protein; Unextendable partial coding region. (179 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
    
 0.813
EFL27138.1
Sensor histidine kinase/response regulator.
     
 0.677
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.506
EFL23975.1
Rod shape-determining protein MreB.
       0.482
EFL24689.1
RNA polymerase sigma-70 factor, ECF subfamily.
   
   0.462
EFL20339.1
Putative alanine-rich protein.
    
 
 0.452
EFL20721.1
Conserved hypothetical protein.
    
 
 0.452
EFL20952.1
Putative glycosyl hydrolase.
    
 
 0.452
EFL21246.1
Conserved hypothetical protein.
    
 
 0.452
EFL21423.1
Putative per-hexamer repeat protein 5.
    
 
 0.452
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.