STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23975.1Rod shape-determining protein MreB. (382 aa)    
Predicted Functional Partners:
EFL26139.1
Putative rod shape-determining protein; Involved in formation and maintenance of cell shape.
 
 
 0.979
EFL22806.1
Putative membrane protein.
 
 
 0.972
EFL26141.1
Penicillin-binding protein 2.
 
 
 
 0.856
EFL26142.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
 
 
 0.828
EFL23718.1
Putative penicillin-binding protein.
 
 
 
 0.776
EFL26855.1
Penicillin binding protein transpeptidase domain protein.
 
 
 
 0.775
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.744
EFL25790.1
Peptidoglycan glycosyltransferase.
 
 
 
 0.740
EFL21700.1
Putative penicillin-binding protein.
 
 
 
 0.716
EFL26134.1
Putative penicillin-binding protein.
 
 
 
 0.630
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.