STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24005.1Putative nucleoside-diphosphate-sugar epimerase. (213 aa)    
Predicted Functional Partners:
EFL24006.1
Putative oxidoreductase YdbC.
  
    0.781
EFL22444.1
Conserved hypothetical protein.
   
    0.662
EFL27439.1
Permease.
   
    0.580
EFL28335.1
Permease.
   
    0.580
arcA
Arginine deiminase.
   
    0.575
EFL24007.1
TetR family transcriptional regulator.
       0.550
EFL24008.1
Conserved hypothetical protein.
       0.550
EFL22561.1
LigA protein.
  
    0.527
EFL28550.1
3-demethylubiquinone-9 3-methyltransferase domain protein.
   
    0.481
EFL21658.1
Conserved hypothetical protein.
   
    0.480
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.