STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24008.1Conserved hypothetical protein. (266 aa)    
Predicted Functional Partners:
EFL24007.1
TetR family transcriptional regulator.
       0.773
EFL24784.1
HTH_3 family transcriptional regulator.
   
 
 0.760
EFL26247.1
HTH_3 family transcriptional regulator.
   
 
 0.760
EFL24005.1
Putative nucleoside-diphosphate-sugar epimerase.
       0.550
EFL24006.1
Putative oxidoreductase YdbC.
       0.550
EFL28083.1
Conserved hypothetical alanine-rich protein.
  
     0.535
EFL24321.1
PbsX family transcriptional regulator.
  
   0.456
EFL22439.1
Conserved hypothetical alanine-rich protein.
  
     0.455
EFL29025.1
Putative Helix-turn-helix domain protein.
  
   0.454
EFL28193.1
Xre family toxin-antitoxin system, antitoxin component.
  
   0.448
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.