STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24027.1Putative membrane protein. (298 aa)    
Predicted Functional Partners:
EFL24990.1
Putative thymidylate kinase.
  
 
  0.776
EFL27131.1
Conserved hypothetical protein.
  
     0.773
EFL21443.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.771
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.771
EFL27029.1
Conserved hypothetical protein.
  
     0.771
EFL24248.1
Alanine-rich protein.
  
    0.768
EFL21488.1
Conserved hypothetical protein.
  
  
 0.767
EFL25254.1
Conserved hypothetical protein.
  
     0.766
EFL22810.1
Putative regulatory protein; Truncated CDS.
  
     0.764
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.760
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.