STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24033.1Putative ATP/GTP-binding protein. (1099 aa)    
Predicted Functional Partners:
EFL20928.1
PE-PGRS family protein.
  
     0.721
EFL29151.1
Putative tetratricopeptide TPR_4.
  
     0.721
EFL20925.1
Collagen alpha-1(III) chain.
  
     0.699
EFL27103.1
Pectate lyase (PL).
  
     0.514
EFL23120.1
Putative FG-GAP repeat protein.
  
     0.492
EFL23634.1
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.477
EFL20926.1
ATPase.
  
     0.462
EFL22183.1
alpha-N-arabinofuranosidase (Arabinosidase).
  
     0.457
EFL23878.1
LigA protein.
  
     0.448
EFL28251.1
Non-ribosomal peptide synthetase.
  
     0.439
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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