STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24037.1LigA protein; Overlaps another CDS with the same product name. (462 aa)    
Predicted Functional Partners:
EFL24038.1
LigA protein; Overlaps another CDS with the same product name.
 
  0.944
EFL24040.1
Anti-sigma factor B antagonist.
 
  0.942
EFL24041.1
Modulator protein RsbR.
 
  0.941
EFL24039.1
Anti-sigma B factor RsbT.
 
  0.931
EFL22809.1
Sensor histidine kinase/response regulator.
 
 
 0.879
EFL20519.1
Putative membrane protein.
 
  0.845
EFL20622.1
Putative integral membrane sensor protein.
 
  0.841
EFL23318.1
Putative membrane protein.
 
  0.827
EFL24772.1
Putative stage II sporulation protein E (SpoIIE).
 
  
  0.782
EFL24983.1
anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Belongs to the anti-sigma-factor antagonist family.
  
  0.773
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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