Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL24040.1Anti-sigma factor B antagonist. (130 aa)    
Predicted Functional Partners:
EFL24039.1
Anti-sigma B factor RsbT.
 
 0.985
EFL24038.1
LigA protein; Overlaps another CDS with the same product name.
 
  0.984
EFL22809.1
Sensor histidine kinase/response regulator.
 
 
 0.954
EFL22288.1
Putative membrane protein; Truncated CDS; unextendable partial coding region.
 
 0.947
EFL20519.1
Putative membrane protein.
 
 0.946
EFL20622.1
Putative integral membrane sensor protein.
 
 0.946
EFL21328.1
Putative PAS fold protein.
  
 0.939
EFL21338.1
Putative membrane protein.
  
 0.939
EFL22564.1
Putative regulatory protein.
  
 0.939
EFL23318.1
Putative membrane protein.
  
 0.939
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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