STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24102.1Conserved hypothetical protein. (252 aa)    
Predicted Functional Partners:
EFL24103.1
Putative transcriptional regulator, GntR family.
 
     0.945
EFL23001.1
Pas:ggdef.
  
 
 0.817
EFL25894.1
Glycosyl transferase.
 
 
0.802
EFL25118.1
Glycosyl transferase.
 
 
0.799
EFL23898.1
Putative tetratricopeptide repeat protein.
  
 
 0.724
EFL20346.1
LigA protein.
  
     0.662
EFL28306.1
Regulatory protein AfsR.
  
   0.614
EFL23098.1
Regulatory protein AfsR.
  
   0.609
EFL21646.1
Putative dolichyl-phosphate beta-glucosyltransferase.
  
 
 0.607
EFL20953.1
crp/Fnr family transcriptional regulator.
  
 
  0.594
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.