STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24190.1Cytochrome c biogenesis membrane protein. (253 aa)    
Predicted Functional Partners:
EFL24188.1
Putative cytochrome C assembly protein.
 
  
 0.996
EFL24191.1
Putative Tat (twin-arginine translocation) domain protein.
 
  
 0.993
EFL24189.1
Cytochrome c biogenesis membrane protein.
 
  
 0.992
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
  
  
 0.881
EFL24193.1
Phosphoglycerate mutase.
  
    0.858
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.723
EFL24195.1
Conserved hypothetical protein.
       0.691
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
 0.673
EFL26790.1
cytoChrome c oxidase subunit III.
  
   
 0.672
EFL26760.1
Conserved hypothetical protein.
   
    0.654
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.