STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24193.1Phosphoglycerate mutase. (232 aa)    
Predicted Functional Partners:
EFL24191.1
Putative Tat (twin-arginine translocation) domain protein.
  
 
 0.984
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
  
    0.981
EFL24189.1
Cytochrome c biogenesis membrane protein.
 
    0.875
EFL24190.1
Cytochrome c biogenesis membrane protein.
  
    0.858
EFL27758.1
Putative glutamate-1-semialdehyde-2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.852
EFL24188.1
Putative cytochrome C assembly protein.
  
    0.826
EFL24195.1
Conserved hypothetical protein.
       0.771
EFL26867.1
Putative integral membrane protein.
  
     0.759
EFL22716.1
Conserved hypothetical protein.
  
     0.758
EFL21380.1
MerR family transcriptional regulator.
  
     0.753
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.