STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24228.1Acyltransferase. (347 aa)    
Predicted Functional Partners:
EFL24229.1
UDP-glucose 4-epimerase.
 
  
 0.973
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.779
EFL28177.1
Linear gramicidin synthetase LgrC.
   
 0.765
EFL28178.1
Non-ribosomal peptide synthetase; Unextendable partial coding region.
   
 0.765
EFL28179.1
Putative phosphopantetheine attachment site; Unextendable partial coding region.
   
 0.765
EFL26806.1
Cyclase/dehydrase.
  
     0.754
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.747
EFL24929.1
Ion-transporting ATPase.
  
     0.742
EFL24930.1
Putative ATPase /MT3781.
  
     0.735
EFL20373.1
Putative type I polyketide synthase WcbR.
  
 0.706
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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