STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24231.1Conserved hypothetical protein. (271 aa)    
Predicted Functional Partners:
EFL24233.1
Putative transmembrane transport protein.
  
    0.815
EFL24230.1
excisionase/Xis, DNA-binding protein.
  
    0.806
EFL24232.1
Acetoin utilization protein AcuC.
       0.801
EFL24234.1
HAD-superfamily hydrolase, subfamily IA.
       0.782
atpE
ATP synthase subunit C (Lipid-binding protein); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
 0.762
EFL26640.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.758
EFL21604.1
Conserved hypothetical protein.
  
     0.739
EFL26527.1
Putative integral-membrane protein.
  
     0.725
EFL22929.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.723
EFL25526.1
Conserved hypothetical protein.
  
     0.723
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.