STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24240.1Sulfate transporter. (502 aa)    
Predicted Functional Partners:
EFL21141.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
 0.978
EFL24944.1
Carbonate dehydratase.
 
 0.928
EFL26930.1
Glutamate synthase large subunit.
    
  0.832
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
    
  0.744
EFL22045.1
Conserved hypothetical protein.
   
   0.735
EFL26853.1
Carbonate dehydratase.
  
 
 0.713
EFL25885.1
ubiquinol-Cytochrome c reductase cytochrome b subunit.
    
 
 0.699
EFL26793.1
ubiquinol-Cytochrome c reductase cytochrome b subunit.
    
 
 0.699
sbcD
Putative nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
   
   0.672
EFL24736.1
Putative serine/threonine phosphatase.
   
   0.672
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.