STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24291.1Putative LacI-family transcriptional regulator. (340 aa)    
Predicted Functional Partners:
EFL24292.1
Transcriptional regulatory protein GlnR.
       0.865
EFL24290.1
Putative trypsin domain protein.
     
 0.861
EFL28411.1
LacI family transcription regulator.
  
     0.770
EFL24293.1
Putative hydrolase.
       0.754
EFL24288.1
Signal transduction histidine-protein kinase/phosphatase MprB.
       0.743
EFL21011.1
Putative DeoR-family transcriptional regulator.
  
     0.706
EFL26930.1
Glutamate synthase large subunit.
    
 
 0.681
EFL22730.1
HPr family phosphocarrier.
 
 
 
 0.633
EFL24296.1
Putative molybdopterin converting factor.
       0.605
EFL24298.1
Putative integral membrane protein.
       0.601
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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