Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24299.1Putative secreted protein. (228 aa)    
Predicted Functional Partners:
EFL24298.1
Putative integral membrane protein.
       0.771
EFL24293.1
Putative hydrolase.
 
     0.638
EFL24296.1
Putative molybdopterin converting factor.
       0.572
EFL27133.1
Putative transcriptional regulator.
  
     0.570
EFL24292.1
Transcriptional regulatory protein GlnR.
       0.564
EFL23366.1
Putative integral membrane protein.
  
     0.557
EFL24308.1
Putative AmfC protein.
  
     0.539
EFL22752.1
Conserved hypothetical protein.
  
     0.533
EFL24692.1
Putative membrane protein.
  
     0.515
EFL24295.1
Putative ABC transporter ATP-binding protein.
       0.511
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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