Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24321.1PbsX family transcriptional regulator. (133 aa)    
Predicted Functional Partners:
EFL24322.1
Conserved hypothetical protein.
       0.857
EFL26806.1
Cyclase/dehydrase.
  
     0.763
EFL24323.1
Putative membrane protein.
       0.746
EFL24930.1
Putative ATPase /MT3781.
  
     0.736
EFL25109.1
Conserved hypothetical protein.
  
     0.713
EFL23389.1
Putative ABC transporter, ATP-binding protein; Truncated CDS.
  
     0.696
EFL24228.1
Acyltransferase.
  
     0.693
EFL24929.1
Ion-transporting ATPase.
  
     0.674
EFL24685.1
GNAT family acetyltransferase.
  
     0.633
EFL24229.1
UDP-glucose 4-epimerase.
  
     0.615
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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