STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24335.1Twin-arginine translocation pathway signal protein. (528 aa)    
Predicted Functional Partners:
EFL23292.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 
 0.685
EFL26930.1
Glutamate synthase large subunit.
    
 0.682
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.669
EFL21240.1
Electron transfer flavoprotein, alpha subunit.
  
 0.634
EFL21532.1
Electron transfer flavoprotein, alpha subunit.
  
 0.634
EFL22310.1
Putative secreted protein.
    
 0.619
EFL26791.1
Cytochrome c family protein.
    
 0.619
EFL22372.1
Putative transposase for insertion sequence element.
  
 0.618
EFL21241.1
Electron transfer flavoprotein, beta subunit.
  
 0.611
EFL21533.1
Electron transfer flavoprotein, beta subunit.
  
 0.611
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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