STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24345.1Putative membrane protein. (585 aa)    
Predicted Functional Partners:
EFL24344.1
Putative ATP/GTP-binding protein.
 
  
 0.979
EFL24341.1
Putative integral membrane protein.
 
   
 0.933
EFL24343.1
Putative membrane protein.
 
     0.887
EFL25735.1
Conserved hypothetical protein.
 
 
 
 0.792
EFL24340.1
Putative integral membrane protein.
       0.720
EFL26097.1
HNH endonuclease.
   
 
 0.715
EFL27197.1
HNH endonuclease.
   
 
 0.715
EFL27523.1
Conserved hypothetical protein.
   
 
 0.715
EFL27525.1
Hypothetical protein.
   
 
 0.715
EFL22874.1
Putative ATP/GTP-binding protein.
 
     0.686
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.