STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24351.1FAD dependent oxidoreductase. (409 aa)    
Predicted Functional Partners:
EFL26930.1
Glutamate synthase large subunit.
    
 0.847
EFL23529.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.819
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.801
EFL24350.1
Sporulation protein; Truncated CDS; 55.5 kDa and 49.5 kDa sporulation proteins (ORF1590 and ORF1422).
       0.735
EFL23972.1
Glycerol-3-phosphate dehydrogenase; Truncated CDS; unextendable partial coding region.
     
 0.732
EFL27372.1
Glycerol-3-phosphate dehydrogenase.
     
 0.732
EFL20483.1
Oxidoreductase, FAD-binding.
    
 0.724
EFL25222.1
Oxidoreductase, FAD-binding.
    
 0.724
EFL29325.1
Oxidoreductase, FAD-binding.
    
 0.724
EFL21480.1
PTS system enzyme I.
    
  0.714
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.