STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24363.1Putative peptidase. (389 aa)    
Predicted Functional Partners:
EFL24362.1
Aldo/keto reductase family oxidoreductase.
       0.777
EFL21464.1
Chorismate mutase.
   
    0.735
EFL24927.1
Penicillin-binding protein.
  
     0.613
EFL25746.1
Penicillin-binding protein.
  
     0.613
EFL24697.1
Peptidoglycan glycosyltransferase.
  
     0.605
EFL22595.1
Putative penicillin-binding protein.
  
     0.586
EFL26687.1
Conserved hypothetical protein.
    
 
 0.546
EFL23538.1
Penicillin-binding protein.
  
     0.542
EFL21700.1
Putative penicillin-binding protein.
 
   
 0.509
EFL24780.1
Hypothetical protein.
  
 
 0.497
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.