STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24379.1Probable 5-dehydro-4-deoxyglucarate dehydratase 1 (5-keto-4-deoxy-glucarate dehydratase 1) (KDGDH 1); Belongs to the DapA family. (303 aa)    
Predicted Functional Partners:
EFL24380.1
Mandelate racemase/muconate lactonizing enzyme family protein.
 
  
 0.984
EFL22108.1
Mandelate racemase/muconate lactonizing enzyme family protein.
 
  
 0.932
EFL24381.1
Putative alanine-rich protein.
 
    0.878
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.838
EFL23592.1
Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.725
EFL27110.1
Fatty aldehyde dehydrogenase.
 
 
  0.702
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.698
EFL24905.1
Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
 
 
 0.697
EFL22319.1
Mandelate racemase/muconate lactonizing enzyme family protein.
    
 0.660
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.657
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.