STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24380.1Mandelate racemase/muconate lactonizing enzyme family protein. (414 aa)    
Predicted Functional Partners:
EFL24379.1
Probable 5-dehydro-4-deoxyglucarate dehydratase 1 (5-keto-4-deoxy-glucarate dehydratase 1) (KDGDH 1); Belongs to the DapA family.
 
  
 0.984
EFL27080.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.933
EFL22107.1
5-dehydro-4-deoxyglucarate dehydratase (5-keto-4-deoxy-glucarate dehydratase) (KDGDH); Belongs to the DapA family.
 
  
 0.926
EFL24381.1
Putative alanine-rich protein.
 
     0.913
EFL22319.1
Mandelate racemase/muconate lactonizing enzyme family protein.
 
  
  0.811
EFL23592.1
Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 
0.781
EFL28509.1
Starvation sensing protein; Unextendable partial coding region.
  
  
  0.738
EFL20620.1
Galactonate dehydratase.
  
  
 
0.681
EFL28848.1
Starvation-sensing protein RspA.
  
  
 
0.648
EFL27081.1
Putative alanine-rich protein.
 
     0.646
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.