STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24381.1Putative alanine-rich protein. (404 aa)    
Predicted Functional Partners:
EFL24380.1
Mandelate racemase/muconate lactonizing enzyme family protein.
 
     0.913
EFL24379.1
Probable 5-dehydro-4-deoxyglucarate dehydratase 1 (5-keto-4-deoxy-glucarate dehydratase 1) (KDGDH 1); Belongs to the DapA family.
 
    0.878
EFL24376.1
Putative sugar binding protein.
 
     0.747
EFL20573.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2).
  
     0.613
EFL24377.1
Sugar ABC transporter, permease.
 
     0.591
EFL24378.1
Carbohydrate uptake 1 (CUT1) family ABC transporter, permease.
 
     0.556
EFL26717.1
Conserved hypothetical protein.
  
     0.550
EFL27079.1
NAD-dependent epimerase/dehydratase.
 
    0.548
EFL24836.1
LysR family transcriptional regulator.
  
     0.493
EFL22624.1
Alpha-1,2-mannosidase.
  
     0.490
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.