Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24400.1Putative integral membrane protein. (345 aa)    
Predicted Functional Partners:
EFL24401.1
ATP-dependent helicase HrpA.
       0.786
EFL28450.1
Putative membrane protein.
 
     0.712
EFL27991.1
Conserved hypothetical protein.
  
     0.632
EFL20529.1
Major facilitator family permease.
  
     0.628
EFL24974.1
Hypothetical protein.
  
     0.610
EFL24278.1
Conserved hypothetical protein.
  
     0.554
EFL29291.1
Conserved hypothetical protein.
  
    0.551
EFL27188.1
ABC transporter, ATP-binding protein.
  
 
  0.549
EFL28900.1
ABC transporter, ATP-binding protein.
  
 
  0.549
EFL23033.1
Hypothetical protein.
  
     0.548
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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