Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24402.1Conserved domain protein. (68 aa)    
Predicted Functional Partners:
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
     
  0.706
EFL20489.1
Hypothetical protein.
  
     0.693
EFL21837.1
Putative membrane protein.
  
     0.626
EFL23362.1
Anti-sigma factor, family protein.
  
     0.611
EFL25575.1
Putative two-component system sensor kinase.
  
     0.560
EFL26965.1
SAM-dependent methyltransferase.
  
     0.544
EFL22940.1
Acylphosphatase.
    
  0.536
EFL24696.1
Transcriptional regulator, PadR family protein.
 
     0.491
EFL24123.1
Putative oxidoreductase.
     
  0.475
EFL24477.1
Putative regulatory protein.
  
     0.438
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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