Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24410.1Conserved hypothetical protein. (134 aa)    
Predicted Functional Partners:
EFL24409.1
Conserved hypothetical protein.
       0.789
EFL22347.1
methylmalonyl-CoA mutase.
     
  0.647
EFL24270.1
Hypothetical protein.
  
  
  0.577
EFL23028.1
Putative toxin-antitoxin system, toxin component.
  
     0.574
EFL26169.1
Conserved hypothetical protein.
       0.572
EFL26170.1
DNA polymerase III, delta subunit.
       0.572
EFL26461.1
Conserved hypothetical protein.
  
     0.534
EFL27945.1
Putative cupin domain protein.
  
     0.509
EFL25964.1
Nipsnap superfamily protein.
  
     0.508
EFL21251.1
Glyoxalase.
 
    0.498
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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