Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL24416.1Putative integral membrane protein. (308 aa)    
Predicted Functional Partners:
EFL24415.1
ABC transporter, ATP-binding protein.
 
 
 0.963
EFL24418.1
DNA-binding response regulator.
 
   
 0.889
EFL24417.1
Putative two-component system sensor kinase.
 
  
 0.803
hmtQ
ABC-type efflux protein, ATP-binding protein.
 
 
 0.637
EFL25865.1
Fatty acid binding protein.
  
  
 0.596
EFL22058.1
Putative ABC transporter membrane component.
    
  0.514
EFL27014.1
ABC-type efflux system, permease.
  
  
  0.514
EFL23171.1
Putative ABC transporter transmembrane protein.
 
 
 0.499
EFL28025.1
Putative ABC transporter integral membrane protein.
 
 
 0.498
EFL23492.1
Putative extracellular solute-binding dependent transport lipoprotein.
  
  
  0.461
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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