STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24416.1Putative integral membrane protein. (308 aa)    
Predicted Functional Partners:
EFL24415.1
ABC transporter, ATP-binding protein.
 
 
 0.970
EFL24418.1
DNA-binding response regulator.
 
   
 0.909
EFL24417.1
Putative two-component system sensor kinase.
 
  
 0.847
hmtQ
ABC-type efflux protein, ATP-binding protein.
 
 
 0.704
EFL25865.1
Fatty acid binding protein.
  
  
 0.616
EFL22058.1
Putative ABC transporter membrane component.
    
  0.514
EFL27014.1
ABC-type efflux system, permease.
  
  
  0.514
EFL23171.1
Putative ABC transporter transmembrane protein.
 
 
 0.510
EFL28025.1
Putative ABC transporter integral membrane protein.
 
 
 0.509
EFL23456.1
Sensor histidine kinase.
  
  
 0.464
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.