STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24448.1Spermidine synthase. (324 aa)    
Predicted Functional Partners:
EFL24449.1
Conserved hypothetical protein.
 
     0.949
EFL23758.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
     
 0.938
EFL20923.1
Purine and other phosphorylase, family 1; Unextendable partial coding region.
     
 0.920
argD
Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
     
 0.744
EFL21168.1
Putative spermidine synthase.
    
  0.731
EFL25883.1
Probable spermidine synthase.
    
  0.731
EFL20452.1
Flavin-containing superfamily amine oxidase.
   
 
 0.702
EFL21776.1
Lysine monooxygenase.
   
 
 0.702
EFL26051.1
Lysine monooxygenase.
   
 
 0.702
EFL24453.1
Aminotransferase, class I.
    
 0.672
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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