Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24448.1Spermidine synthase. (324 aa)    
Predicted Functional Partners:
EFL24449.1
Conserved hypothetical protein.
 
     0.943
EFL23758.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
     
 0.907
EFL20923.1
Purine and other phosphorylase, family 1; Unextendable partial coding region.
     
 0.884
EFL26864.1
YfiH protein; Belongs to the multicopper oxidase YfiH/RL5 family.
    
  0.860
argD
Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
     
 0.743
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.734
EFL22458.1
Chlorohydrolase.
     
  0.725
EFL25957.1
Diamine N-acetyltransferase.
     
  0.707
EFL23269.1
Agmatinase; Belongs to the arginase family.
     
  0.690
EFL25935.1
Agmatinase; Belongs to the arginase family.
     
  0.690
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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