Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24481.1Conserved hypothetical protein; Truncated CDS. (109 aa)    
Predicted Functional Partners:
EFL25174.1
Trehalose-phosphate synthase.
  
 
 0.869
EFL26245.1
Conserved hypothetical protein.
  
 0.863
EFL20527.1
Putative secreted protein.
  
     0.709
EFL22094.1
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1).
  
    0.702
EFL26727.1
Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase).
  
 
 0.687
EFL22321.1
Catalase HPII.
   
  
 0.656
EFL21366.1
Putative secreted protein.
  
     0.637
EFL21630.1
Non-ribosomal peptide synthetase.
   
 0.629
EFL28740.1
Type I polyketide synthase AVES 2; Unextendable partial coding region.
   
 0.601
EFL20782.1
Modular polyketide synthase; Overlaps another CDS with the same product name; unextendable partial coding region.
   
 
  0.598
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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