Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24485.1Putative transposase. (208 aa)    
Predicted Functional Partners:
EFL24484.1
Putative transposase.
 
     0.946
EFL20366.1
Putative transposase.
  
     0.774
EFL23624.1
Putative transposase.
  
     0.774
EFL27513.1
IS630 family transposase.
 
    0.769
EFL21958.1
Conserved hypothetical protein.
 
 
 0.756
EFL22994.1
Conserved hypothetical protein.
  
     0.690
EFL25269.1
Conserved hypothetical protein.
  
     0.662
EFL24981.1
Putative integrase; Belongs to the 'phage' integrase family.
  
     0.590
EFL21957.1
Putative integrase.
  
     0.508
EFL24482.1
Conserved hypothetical protein.
       0.506
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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