Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24498.1Conserved hypothetical protein. (123 aa)    
Predicted Functional Partners:
EFL27189.1
Putative membrane protein.
  
     0.583
EFL29327.1
Regulatory protein AfsR.
  
     0.493
EFL23931.1
Regulatory protein AfsR.
  
     0.489
EFL24232.1
Acetoin utilization protein AcuC.
   
   0.489
EFL23295.1
LigA protein.
  
     0.478
EFL24141.1
Putative oxidoreductase.
 
    0.477
EFL23901.1
Putative transcriptional regulator, XRE family.
  
     0.465
EFL27152.1
Conserved hypothetical protein.
  
     0.456
EFL23619.1
55.5 kDa and 49.5 kDa sporulation proteins (ORF1590 and ORF1422).
  
     0.451
EFL24832.1
Conserved hypothetical protein.
  
     0.449
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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