STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24517.1ATP/GTP binding protein. (179 aa)    
Predicted Functional Partners:
EFL24516.1
Hypothetical protein.
       0.524
EFL25173.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.480
EFL21121.1
Putative acetyltransferase.
  
     0.466
EFL22323.1
Conserved hypothetical protein.
   
    0.465
EFL21366.1
Putative secreted protein.
   
    0.459
EFL24481.1
Conserved hypothetical protein; Truncated CDS.
   
    0.459
EFL22191.1
Putative ricin-type beta-trefoil lectin domain protein.
  
     0.447
EFL20333.1
Putative phosphatase SCF76.19c.
  
     0.403
EFL21591.1
Ring-cleaving dioxygenase.
  
     0.400
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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