Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24520.1Conserved hypothetical protein. (187 aa)    
Predicted Functional Partners:
EFL24521.1
LigA protein.
       0.773
EFL26868.1
Putative DivIVA domain protein.
   
 
 0.719
EFL24079.1
Conserved hypothetical protein.
    
 
 0.631
EFL23067.1
Putative glycosyl hydrolase.
     
 0.587
EFL24518.1
Putative transcriptional regulator.
       0.536
EFL24519.1
Conserved hypothetical protein.
       0.536
EFL21700.1
Putative penicillin-binding protein.
   
 0.520
EFL23718.1
Putative penicillin-binding protein.
   
 0.520
EFL24653.1
Penicillin binding protein transpeptidase domain protein.
   
 0.520
EFL25790.1
Peptidoglycan glycosyltransferase.
   
 0.520
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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