STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24530.1CopY family transcriptional repressor. (137 aa)    
Predicted Functional Partners:
EFL29039.1
Putative integral membrane protein.
 
 
  0.825
EFL27615.1
Integral membrane protein.
 
 
  0.763
EFL28755.1
Integral membrane protein.
 
 
  0.756
EFL27616.1
CopY family transcriptional repressor.
  
     0.742
EFL28756.1
CopY family transcriptional repressor.
  
     0.715
EFL21548.1
Putative integral membrane protein.
 
 
  0.681
EFL22179.1
Conserved domain protein.
 
  
 0.637
EFL25997.1
Heavy metal-associated domain protein.
 
  
 0.578
EFL24531.1
Tellurium resistance protein TerD.
       0.567
EFL24532.1
LigA protein.
       0.532
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.