Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24544.1Putative bacterial stress protein. (687 aa)    
Predicted Functional Partners:
EFL21217.1
Putative regulatory protein.
   
    0.748
EFL28914.1
Probable sulfopyruvate decarboxylase alpha subunit.
   
    0.732
EFL28852.1
Formate dehydrogenase, iron-sulfur subunit; Unextendable partial coding region.
   
    0.703
EFL27086.1
Conserved hypothetical protein.
  
     0.662
EFL28757.1
Putative bacterial stress protein.
  
     0.641
EFL28443.1
PE-PGRS family protein.
  
     0.608
EFL26013.1
Conserved hypothetical protein.
  
     0.600
EFL26475.1
Tellurium resistance protein TerA.
  
     0.589
EFL26985.1
Tellurium resistance protein TerZ.
  
     0.587
EFL23033.1
Hypothetical protein.
  
     0.573
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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