STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24565.1Putative short chain dehydrogenase. (258 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
  
 
 0.769
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.756
EFL26930.1
Glutamate synthase large subunit.
    
  0.654
EFL24566.1
TetR-type regulator.
 
     0.642
EFL28729.1
Modular polyketide synthase.
 
 
 0.623
EFL28736.1
Polyketide synthase.
 
 
 0.615
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.614
EFL20601.1
Mycocerosic acid synthase.
 
 
 0.605
EFL28740.1
Type I polyketide synthase AVES 2; Unextendable partial coding region.
   
 0.605
EFL20795.1
Modular polyketide synthase.
   
  0.580
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (52%) [HD]