Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL24578.1Conserved hypothetical protein. (347 aa)    
Predicted Functional Partners:
EFL26506.1
Sensory box histidine kinase/response regulator.
  
    0.718
EFL28251.1
Non-ribosomal peptide synthetase.
  
    0.708
EFL22111.1
Periplasmic sensor signal transduction histidine kinase.
  
     0.660
EFL25923.1
PE-PGRS family protein.
  
     0.644
EFL22109.1
LigA protein.
  
     0.638
EFL20616.1
Putative membrane protein SCJ1.26.
  
     0.603
EFL29198.1
Hypothetical protein.
  
    0.580
EFL28445.1
Conserved hypothetical protein.
  
     0.574
EFL28263.1
LigA protein.
  
     0.552
EFL27479.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.535
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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