STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24584.1Putative response regulator. (141 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.968
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.911
metG
methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.743
EFL20994.1
GAF family protein.
  
 0.501
EFL21495.1
GAF family protein.
  
 0.501
EFL24743.1
Sensor kinase, two-component system; Unextendable partial coding region.
  
 0.501
EFL24742.1
GAF family protein.
  
  0.490
EFL27190.1
Putative two-component system sensor kinase; Truncated CDS.
  
  0.490
EFL23001.1
Pas:ggdef.
  
 
 0.460
EFL20670.1
Sensor histidine kinase/response regulator.
  
 0.428
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.