STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL24617.1Non-specific serine/threonine protein kinase. (506 aa)    
Predicted Functional Partners:
EFL28982.1
Protein phosphatase.
 
 
 0.968
EFL26084.1
Protein serine/threonine phosphatase; Truncated CDS; unextendable partial coding region.
 
 
 0.929
EFL21383.1
Forkhead-associated.
 
 
 
 0.865
EFL24649.1
FHA domain protein; Truncated CDS; unextendable partial coding region.
 
 
 
 0.857
EFL27188.1
ABC transporter, ATP-binding protein.
  
 
 0.855
EFL28900.1
ABC transporter, ATP-binding protein.
  
 
 0.855
EFL24650.1
Putative FHA domain protein.
 
 
 
 0.849
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.845
EFL22371.1
Basic proline-rich protein.
  
 
 0.832
EFL22373.1
Hypothetical protein.
  
 
 0.832
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.